COnsensus-DEgenerate Hybrid Oligonucleotide Primers
um ótimo site para desenho de sequencia multipla de aligment’s
pra você que busca praticidade este link é maravilhoso confira!
PCR primers designed from protein multiple sequence alignments
- Getting started
- Full Help file
- The CODEHOP algorithm
- The CODEHOP manuscript
- Genes identified using CODEHOP
- The input should be a set of local multiple alignments (blocks) of a group of related protein sequences. The alignments must be in Blocks Database format, such as in Block Maker
- Ungapped parts of Clustal- or FASTA-formatted global multiple alignments can be automatically turned into blocks by the Blocks multiple alignment processor. You can also manually reformat multiple sequence alignments with the Blocks formatter.
- The output of all these programs contains links that send the resulting blocks to this page.
- If your sequences align globally, you will get better multiple alignment results from Clustal than from the motif finders used by Block Maker.
- Blocks are processed using sequence weights (the numbers following each sequence segment). To emphasize particular sequences in the block(s) manually adjust the sequence weights. Increase the number to give a sequence more weight.
output.
pra quem quiser a pagina traduzida paa melhor entendimento clique aqui!
Fonte: http://bioinformatics.weizmann.ac.il
Creditos: Dr O.liverkall (:
0 comentários:
Postar um comentário